STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Gbro_3508PFAM: major facilitator superfamily MFS_1; KEGG: bja:blr2806 nitrite extrusion protein. (496 aa)    
Predicted Functional Partners:
Gbro_3699
KEGG: dat:HRM2_00660 NarG; TIGRFAM: nitrate reductase, alpha subunit; PFAM: molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
 
 
 0.997
Gbro_3700
TIGRFAM: nitrate reductase, beta subunit; KEGG: bpt:Bpet4990 nitrate reductase, beta chain.
 
 
 0.997
Gbro_3702
KEGG: dat:HRM2_00630 NarI; TIGRFAM: respiratory nitrate reductase, gamma subunit; PFAM: Nitrate reductase gamma subunit.
 
 
 0.997
Gbro_3703
PFAM: major facilitator superfamily MFS_1; KEGG: sme:SM_b20436 putative nitrate transporter protein.
  
0.994
Gbro_3506
TIGRFAM: nitrite reductase [NAD(P)H], small subunit; KEGG: ypb:YPTS_3936 nitrite reductase small subunit.
 
 
 0.993
Gbro_3507
TIGRFAM: nitrite reductase [NAD(P)H], large subunit; PFAM: nitrite and sulphite reductase 4Fe-4S region; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; BFD domain protein [2Fe-2S]-binding domain protein; nitrite/sulfite reductase hemoprotein beta- component ferrodoxin domain protein; KEGG: cti:RALTA_B0613 NADH-dependent nitrite reductase.
 
 
 0.991
Gbro_3701
TIGRFAM: nitrate reductase molybdenum cofactor assembly chaperone; PFAM: Nitrate reductase delta subunit; KEGG: mpt:Mpe_A1706 respiratory nitrate reductase chaperone NarJ.
 
  
 0.975
Gbro_1392
TIGRFAM: nitrite reductase [NAD(P)H], large subunit; PFAM: nitrite and sulphite reductase 4Fe-4S region; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; BFD domain protein [2Fe-2S]-binding domain protein; nitrite/sulfite reductase hemoprotein beta- component ferrodoxin domain protein; KEGG: scl:sce3488 nitrite reductase.
 
 
 0.964
Gbro_1393
PFAM: Rieske [2Fe-2S] iron-sulphur domain; KEGG: scl:sce3489 nitrite reductase small subunit.
 
 
 0.938
Gbro_3505
PFAM: Uroporphyrinogen III synthase HEM4; transcriptional regulator domain protein; KEGG: aeh:Mlg_1707 uroporphyrinogen III synthase HEM4.
 
  
 0.933
Your Current Organism:
Gordonia bronchialis
NCBI taxonomy Id: 526226
Other names: G. bronchialis DSM 43247, Gordonia bronchialis ATCC 25592, Gordonia bronchialis CCUG 20989, Gordonia bronchialis CCUG 34956, Gordonia bronchialis CIP 100847, Gordonia bronchialis DSM 43247, Gordonia bronchialis IFO 6047, Gordonia bronchialis JCM 3198, Gordonia bronchialis JCM 3231, Gordonia bronchialis LMG 5355, Gordonia bronchialis NBRC 16047, Gordonia bronchialis NCTC 10667, Gordonia bronchialis VKM Ac-956, Gordonia bronchialis str. DSM 43247, Gordonia bronchialis str. Tsukamura 3410, Gordonia bronchialis strain DSM 43247
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