Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Gbro_1974 | Gbro_4484 | Gbro_1974 | Gbro_4484 | KEGG: bba:Bd3290 hypothetical protein. | KEGG: predicted protein. | 0.517 |
Gbro_2139 | Gbro_4484 | Gbro_2139 | Gbro_4484 | KEGG: cbg:CbuG_0193 hypothetical protein. | KEGG: predicted protein. | 0.443 |
Gbro_2315 | Gbro_4484 | Gbro_2315 | Gbro_4484 | PFAM: Protein of unknown function DUF2126; transglutaminase domain protein; transglutaminase domain protein; SMART: transglutaminase domain protein; KEGG: tgr:Tgr7_1014 transglutaminase domain protein. | KEGG: predicted protein. | 0.558 |
Gbro_3879 | Gbro_4483 | Gbro_3879 | Gbro_4483 | PFAM: acyl-ACP thioesterase; KEGG: acyl-(acyl carrier protein) thioesterase, putative / acyl-ACP thioesterase, putative / oleoyl- (acyl-carrier protein) hydrolase, putative / S-acyl fatty acid synthase thioesterase, putative. | PFAM: conserved hypothetical protein; KEGG: psa:PST_3725 Mg2+ transport ATPase. | 0.539 |
Gbro_3879 | Gbro_4484 | Gbro_3879 | Gbro_4484 | PFAM: acyl-ACP thioesterase; KEGG: acyl-(acyl carrier protein) thioesterase, putative / acyl-ACP thioesterase, putative / oleoyl- (acyl-carrier protein) hydrolase, putative / S-acyl fatty acid synthase thioesterase, putative. | KEGG: predicted protein. | 0.408 |
Gbro_4482 | Gbro_4483 | Gbro_4482 | Gbro_4483 | PFAM: protein of unknown function UPF0118; KEGG: mxa:MXAN_7270 hypothetical protein. | PFAM: conserved hypothetical protein; KEGG: psa:PST_3725 Mg2+ transport ATPase. | 0.836 |
Gbro_4482 | Gbro_4484 | Gbro_4482 | Gbro_4484 | PFAM: protein of unknown function UPF0118; KEGG: mxa:MXAN_7270 hypothetical protein. | KEGG: predicted protein. | 0.641 |
Gbro_4483 | Gbro_3879 | Gbro_4483 | Gbro_3879 | PFAM: conserved hypothetical protein; KEGG: psa:PST_3725 Mg2+ transport ATPase. | PFAM: acyl-ACP thioesterase; KEGG: acyl-(acyl carrier protein) thioesterase, putative / acyl-ACP thioesterase, putative / oleoyl- (acyl-carrier protein) hydrolase, putative / S-acyl fatty acid synthase thioesterase, putative. | 0.539 |
Gbro_4483 | Gbro_4482 | Gbro_4483 | Gbro_4482 | PFAM: conserved hypothetical protein; KEGG: psa:PST_3725 Mg2+ transport ATPase. | PFAM: protein of unknown function UPF0118; KEGG: mxa:MXAN_7270 hypothetical protein. | 0.836 |
Gbro_4483 | Gbro_4484 | Gbro_4483 | Gbro_4484 | PFAM: conserved hypothetical protein; KEGG: psa:PST_3725 Mg2+ transport ATPase. | KEGG: predicted protein. | 0.834 |
Gbro_4484 | Gbro_1974 | Gbro_4484 | Gbro_1974 | KEGG: predicted protein. | KEGG: bba:Bd3290 hypothetical protein. | 0.517 |
Gbro_4484 | Gbro_2139 | Gbro_4484 | Gbro_2139 | KEGG: predicted protein. | KEGG: cbg:CbuG_0193 hypothetical protein. | 0.443 |
Gbro_4484 | Gbro_2315 | Gbro_4484 | Gbro_2315 | KEGG: predicted protein. | PFAM: Protein of unknown function DUF2126; transglutaminase domain protein; transglutaminase domain protein; SMART: transglutaminase domain protein; KEGG: tgr:Tgr7_1014 transglutaminase domain protein. | 0.558 |
Gbro_4484 | Gbro_3879 | Gbro_4484 | Gbro_3879 | KEGG: predicted protein. | PFAM: acyl-ACP thioesterase; KEGG: acyl-(acyl carrier protein) thioesterase, putative / acyl-ACP thioesterase, putative / oleoyl- (acyl-carrier protein) hydrolase, putative / S-acyl fatty acid synthase thioesterase, putative. | 0.408 |
Gbro_4484 | Gbro_4482 | Gbro_4484 | Gbro_4482 | KEGG: predicted protein. | PFAM: protein of unknown function UPF0118; KEGG: mxa:MXAN_7270 hypothetical protein. | 0.641 |
Gbro_4484 | Gbro_4483 | Gbro_4484 | Gbro_4483 | KEGG: predicted protein. | PFAM: conserved hypothetical protein; KEGG: psa:PST_3725 Mg2+ transport ATPase. | 0.834 |
Gbro_4484 | mshD | Gbro_4484 | Gbro_3934 | KEGG: predicted protein. | Mycothiol biosynthesis acetyltransferase; Catalyzes the transfer of acetyl from acetyl-CoA to desacetylmycothiol (Cys-GlcN-Ins) to form mycothiol. | 0.402 |
mshD | Gbro_4484 | Gbro_3934 | Gbro_4484 | Mycothiol biosynthesis acetyltransferase; Catalyzes the transfer of acetyl from acetyl-CoA to desacetylmycothiol (Cys-GlcN-Ins) to form mycothiol. | KEGG: predicted protein. | 0.402 |