STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Gbro_4511KEGG: aeh:Mlg_2715 daunorubicin resistance ABC transporter ATPase subunit; TIGRFAM: daunorubicin resistance ABC transporter ATPase subunit; PFAM: ABC transporter related; SMART: AAA ATPase. (380 aa)    
Predicted Functional Partners:
Gbro_4512
PFAM: ABC-2 type transporter; KEGG: aeh:Mlg_2716 ABC-2 type transporter.
  
 0.970
Gbro_2726
PFAM: ABC-2 type transporter; KEGG: sat:SYN_01456 export ABC transporter permease protein.
  
 0.949
Gbro_0654
PFAM: ABC-2 type transporter; KEGG: aeh:Mlg_2716 ABC-2 type transporter.
 
  
 0.883
Gbro_3737
PFAM: ABC-2 type transporter; KEGG: aeh:Mlg_2716 ABC-2 type transporter.
 
  
 0.876
Gbro_1622
PFAM: ABC-2 type transporter; KEGG: ank:AnaeK_4023 ABC-2 type transporter.
  
 0.873
Gbro_3736
PFAM: ABC-2 type transporter; KEGG: mes:Meso_2100 ABC-2 type transporter.
 
  
 0.866
Gbro_0655
PFAM: ABC-2 type transporter; KEGG: aeh:Mlg_2716 ABC-2 type transporter.
 
  
 0.860
Gbro_3718
PFAM: ABC-2 type transporter; KEGG: ank:AnaeK_4023 ABC-2 type transporter.
  
 0.858
Gbro_1533
PFAM: ABC-2 type transporter; KEGG: har:HEAR2357 ABC-type drug export system, membrane protein.
 
  
 0.844
Gbro_0598
PFAM: ABC-2 type transporter; KEGG: aeh:Mlg_2716 ABC-2 type transporter.
 
   
 0.778
Your Current Organism:
Gordonia bronchialis
NCBI taxonomy Id: 526226
Other names: G. bronchialis DSM 43247, Gordonia bronchialis ATCC 25592, Gordonia bronchialis CCUG 20989, Gordonia bronchialis CCUG 34956, Gordonia bronchialis CIP 100847, Gordonia bronchialis DSM 43247, Gordonia bronchialis IFO 6047, Gordonia bronchialis JCM 3198, Gordonia bronchialis JCM 3231, Gordonia bronchialis LMG 5355, Gordonia bronchialis NBRC 16047, Gordonia bronchialis NCTC 10667, Gordonia bronchialis VKM Ac-956, Gordonia bronchialis str. DSM 43247, Gordonia bronchialis str. Tsukamura 3410, Gordonia bronchialis strain DSM 43247
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