STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADH62208.1Protein of unknown function DUF2249; COGs: COG4309 conserved hypothetical protein; InterPro IPR018720; KEGG: mag:amb3531 hypothetical protein; PFAM: Protein of unknown function DUF2249; SPTR: C1XRF0 Uncharacterized conserved protein; PFAM: Uncharacterized conserved protein (DUF2249). (96 aa)    
Predicted Functional Partners:
ADH62209.1
KEGG: ttj:TTHB137 hypothetical protein; SPTR: C1XRE9 Putative uncharacterized protein.
 
     0.904
ADH62210.1
Protein of unknown function DUF59; COGs: COG2151 metal-sulfur cluster biosynthetic protein; InterPro IPR002744:IPR002052; KEGG: ttj:TTHB138 hypothetical protein; PFAM: protein of unknown function DUF59; SPTR: C1XRE8 Predicted metal-sulfur cluster biosynthetic enzyme; PFAM: Domain of unknown function DUF59.
       0.584
ADH63586.1
COGs: COG0069 Glutamate synthase domain 2; InterProIPR006982:IPR002489:IPR002932:IPR017932:IPR 000583; KEGG: ttj:TTHA1468 glutamate synthase, large subunit; PFAM: ferredoxin-dependent glutamate synthase; glutamate synthase; glutamine amidotransferase class-II; glutamate synthase alpha subunit domain protein; PRIAM: Glutamate synthase (ferredoxin); SPTR: C1XYW8 Glutamate synthase (Ferredoxin); PFAM: Conserved region in glutamate synthase; GXGXG motif; Glutamate synthase central domain; Glutamine amidotransferases class-II.
   
    0.519
Your Current Organism:
Meiothermus silvanus
NCBI taxonomy Id: 526227
Other names: M. silvanus DSM 9946, Meiothermus silvanus ATCC 700542, Meiothermus silvanus DSM 9946, Meiothermus silvanus VI-R2, Meiothermus silvanus str. DSM 9946, Meiothermus silvanus strain DSM 9946
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.