STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADH63088.1KEGG: lbf:LBF_1178 hypothetical protein; SPTR: C1XYM2 Putative uncharacterized protein. (205 aa)    
Predicted Functional Partners:
ADH63084.1
Putative hypothetical protein; KEGG: GL23842 gene product from transcript GL23842-RA; SPTR: C1XYM6 Putative uncharacterized protein.
       0.682
ADH63085.1
KEGG: reu:Reut_A1896 N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase; SPTR: C1XYM5 Putative uncharacterized protein.
       0.682
ADH63086.1
Hypothetical protein; SPTR: C1XYM4 Putative uncharacterized protein.
       0.682
ADH63087.1
Hypothetical protein; KEGG: mlb:MLBr_02530 putative DNA-binding protein; SPTR: C1XYM3 Putative uncharacterized protein.
       0.682
ADH63089.1
Helix-hairpin-helix DNA-binding class 1; COGs: COG0507 ATP-dependent exoDNAse (exonuclease V) alpha subunit - helicase superfamily I member; InterPro IPR003583:IPR010994; KEGG: dge:Dgeo_0826 helicase RecD/TraA; SMART: Helix-hairpin-helix DNA-binding class 1; SPTR: C1XYM1 ATP-dependent exoDNAse (Exonuclease V), alpha subunit/helicase superfamily I member; PFAM: Viral (Superfamily 1) RNA helicase.
       0.602
ADH63090.1
VRR-NUC domain protein; InterPro IPR014883; KEGG: xfn:XfasM23_1827 VRR-NUC domain-containing protein; PFAM: VRR-NUC domain protein; SPTR: C1XYM0 VRR-NUC domain-containing protein; PFAM: VRR-NUC domain.
       0.584
ADH63091.1
Protein of unknown function DUF927; COGs: COG5519 Superfamily II helicase and inactivated derivatives; InterPro IPR009270; KEGG: sus:Acid_5998 hypothetical protein; PFAM: protein of unknown function DUF927; SPTR: C1XYL9 DNA/RNA helicase, superfamily II; PFAM: Domain of unknown function (DUF927).
       0.584
ADH63082.1
Transcriptional regulator, XRE family; InterPro IPR010982:IPR001387; KEGG: ate:Athe_2434 transcriptional regulator, XRE family; PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; SPTR: B9MNH1 Transcriptional regulator, XRE family; PFAM: Helix-turn-helix.
       0.560
ADH63083.1
DNA binding domain protein, excisionase family; InterPro IPR010093; KEGG: ddr:Deide_06470 hypothetical protein; SPTR: C1XYM7 DNA-binding protein, excisionase family; TIGRFAM: DNA binding domain protein, excisionase family; TIGRFAM: DNA binding domain, excisionase family.
       0.560
ADH63081.1
Peptidase S24/S26A/S26B, conserved region; COGs: COG1974 SOS-response transcriptional repressors (RecA-mediated autopeptidase); InterPro IPR015927:IPR019756:IPR019759:IPR011056; KEGG: ddr:Deide_01180 putative LexA repressor; PFAM: Peptidase S24/S26A/S26B, conserved region; SPTR: C1XYM8 SOS response transcriptional repressor, RecA-mediated autopeptidase; PFAM: Peptidase S24-like.
       0.408
Your Current Organism:
Meiothermus silvanus
NCBI taxonomy Id: 526227
Other names: M. silvanus DSM 9946, Meiothermus silvanus ATCC 700542, Meiothermus silvanus DSM 9946, Meiothermus silvanus VI-R2, Meiothermus silvanus str. DSM 9946, Meiothermus silvanus strain DSM 9946
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.