STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADH63225.1Type II and III secretion system protein; COGs: COG1450 Type II secretory pathway component PulD; InterPro IPR005644:IPR004846:IPR004845; KEGG: tth:TTC1017 competence protein PilQ; PFAM: type II and III secretion system protein; NolW domain protein; SPTR: C1XXL5 Type II secretory pathway, component PulD; PFAM: Bacterial type II/III secretion system short domain; Bacterial type II and III secretion system protein. (771 aa)    
Predicted Functional Partners:
ADH63229.1
COGs: COG4972 Tfp pilus assembly protein ATPase PilM; InterPro IPR005883; KEGG: tth:TTC1013 pilus-associated protein PilM; SPTR: C1XXL1 Type IV pilus assembly protein PilM; TIGRFAM: type IV pilus assembly protein PilM; PFAM: Competence protein A; Cell division protein FtsA; TIGRFAM: type IV pilus assembly protein PilM.
 
  
 0.909
ADH63226.1
KEGG: ttj:TTHA1382 competence protein PilW; SPTR: C1XXL4 Putative uncharacterized protein.
 
  
 0.873
ADH63228.1
Fimbrial assembly family protein; InterPro IPR007813; KEGG: ttj:TTHA1380 competence protein PilN; PFAM: Fimbrial assembly family protein; SPTR: C1XXL2 Fimbrial assembly protein (PilN); PFAM: Fimbrial assembly protein (PilN).
     
 0.858
ADH63227.1
General secretion pathway protein M; InterPro IPR019677; KEGG: ttj:TTHA1381 competence protein PilO; PFAM: General secretion pathway protein M; SPTR: C1XXL3 General secretion pathway protein M; PFAM: Pilus assembly protein, PilO.
     
 0.853
ADH64131.1
Surface antigen (D15); COGs: COG4775 Outer membrane protein/protective antigen OMA87; InterPro IPR010827:IPR000184; KEGG: ttj:TTHA0561 outer membrane protein; PFAM: surface antigen (D15); surface antigen variable number repeat protein; SPTR: C1XQ30 Outer membrane protein/protective antigen OMA87; PFAM: Surface antigen variable number repeat; Surface antigen; TIGRFAM: outer membrane protein assembly complex, YaeT protein.
  
   
 0.734
ADH64707.1
FHA domain containing protein; InterPro IPR000253:IPR008984; KEGG: dra:DR_A0333 FraH-related protein; PFAM: Forkhead-associated protein; SMART: Forkhead-associated protein; SPTR: C1XTM3 FHA domain-containing protein; PFAM: FHA domain.
  
  
 0.713
ADH62516.1
COGs: COG2804 Type II secretory pathway ATPase PulE/Tfp pilus assembly pathway ATPase PilB; InterPro IPR007831:IPR001482; KEGG: ttj:TTHA0364 type IV pilus assembly protein PilF; PFAM: type II secretion system protein E; General secretory system II protein E domain protein; SPTR: C1XWL4 Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB; PFAM: Type II/IV secretion system protein; GSPII_E N-terminal domain.
 
  
 0.664
ADH63407.1
ABC transporter related protein; COGs: COG1137 ABC-type (unclassified) transport system ATPase component; InterPro IPR017871:IPR003593:IPR003439; KEGG: ttj:TTHA0439 ABC transporter, ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: C1XUQ1 ABC-type (Unclassified) transport system, ATPase component; PFAM: ABC transporter.
 
     0.662
ADH62177.1
TPR repeat-containing protein; InterProIPR001440:IPR011990:IPR019734:IPR011717:IPR 013026; KEGG: scl:sce1774 hypothetical protein; PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_4; SPTR: C1XRI4 Tetratricopeptide repeat protein; PFAM: Tetratricopeptide repeat.
  
  
 0.632
ADH64007.1
Type II secretion system F domain protein; COGs: COG1459 Type II secretory pathway component PulF; InterPro IPR003004:IPR001992:IPR018076; KEGG: ttj:TTHA0794 pilus assembly protein PilC; PFAM: Type II secretion system F domain; SPTR: C1XQG3 Type II secretory pathway, component PulF; PFAM: Bacterial type II secretion system protein F domain; TIGRFAM: general secretion pathway protein F.
 
  
 0.615
Your Current Organism:
Meiothermus silvanus
NCBI taxonomy Id: 526227
Other names: M. silvanus DSM 9946, Meiothermus silvanus ATCC 700542, Meiothermus silvanus DSM 9946, Meiothermus silvanus VI-R2, Meiothermus silvanus str. DSM 9946, Meiothermus silvanus strain DSM 9946
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