STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADH63248.1KEGG: ttj:TTHA0494 hypothetical protein; SPTR: C1XW48 Putative uncharacterized protein. (115 aa)    
Predicted Functional Partners:
ADH63247.1
Peptidase S41; COGs: COG0793 Periplasmic protease; InterPro IPR005151; KEGG: chl:Chy400_1950 peptidase S41; PFAM: peptidase S41; SMART: peptidase S41; SPTR: C1XW49 Periplasmic protease; PFAM: Peptidase family S41.
       0.773
ADH63246.1
ATP-cone domain protein; COGs: COG2074 2-phosphoglycerate kinase; InterPro IPR005144; KEGG: tth:TTC0121 2-phosphoglycerate kinase; PFAM: ATP-cone domain protein; SPTR: C1XW50 2-phosphoglycerate kinase; PFAM: ATP cone domain.
       0.684
ADH63245.1
Integrase catalytic region; InterPro IPR012337:IPR009057:IPR001584; KEGG: saf:SULAZ_1706 putative transposase; PFAM: Integrase catalytic region; SPTR: C1XW51 Integrase family protein; PFAM: Integrase core domain.
       0.449
Your Current Organism:
Meiothermus silvanus
NCBI taxonomy Id: 526227
Other names: M. silvanus DSM 9946, Meiothermus silvanus ATCC 700542, Meiothermus silvanus DSM 9946, Meiothermus silvanus VI-R2, Meiothermus silvanus str. DSM 9946, Meiothermus silvanus strain DSM 9946
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