STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADH63868.1Auxin Efflux Carrier; COGs: COG0679 permease; InterPro IPR004776; KEGG: ttj:TTHA0659 hypothetical protein; PFAM: Auxin Efflux Carrier; SPTR: C1XQV7 Predicted permease; PFAM: Membrane transport protein. (312 aa)    
Predicted Functional Partners:
ADH63951.1
Malate dehydrogenase (oxaloacetate-decarboxylating) (NADP(+)); COGs: COG0281 Malic enzyme; InterProIPR016040:IPR012301:IPR015884:IPR012302:IPR 001891; KEGG: ttj:TTHA0520 malate dehydrogenase; PFAM: malic protein NAD-binding; malic protein domain protein; PRIAM: Malate dehydrogenase (oxaloacetate-decarboxylating) (NADP(+)); SPTR: C1XQM3 Malic enzyme; PFAM: Malic enzyme, NAD binding domain; Malic enzyme, N-terminal domain.
  
  
 0.851
ADH63866.1
Binding-protein-dependent transport systems inner membrane component; COGs: COG1178 ABC-type Fe3+ transport system permease component; InterPro IPR000515; KEGG: rec:RHECIAT_CH0002177 iron(III) ABC transporter, permease protein; PFAM: binding-protein-dependent transport systems inner membrane component; SPTR: C1XZI6 ABC-type Fe3+ transport system, permease component; PFAM: Binding-protein-dependent transport system inner membrane component.
       0.494
fbpC
ABC transporter related protein; Part of the ABC transporter complex FbpABC involved in Fe(3+) ions import. Responsible for energy coupling to the transport system.
       0.491
Your Current Organism:
Meiothermus silvanus
NCBI taxonomy Id: 526227
Other names: M. silvanus DSM 9946, Meiothermus silvanus ATCC 700542, Meiothermus silvanus DSM 9946, Meiothermus silvanus VI-R2, Meiothermus silvanus str. DSM 9946, Meiothermus silvanus strain DSM 9946
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.