STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADH63882.1Peptidase M20; COGs: COG0624 Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylase; InterPro IPR011650:IPR002933; KEGG: ttj:TTHA1130 ArgE/DapE/Acy1 family peptidase; PFAM: peptidase M20; peptidase dimerisation domain protein; SPTR: C1XQU3 Acetylornithine deacetylase/succinyldiaminopimelate desuccinylase-like deacylase; PFAM: Peptidase family M20/M25/M40; Peptidase dimerisation domain. (451 aa)    
Predicted Functional Partners:
ADH63883.1
Dienelactone hydrolase; COGs: COG1506 Dipeptidyl aminopeptidase/acylaminoacyl-peptidase; InterPro IPR002925; KEGG: tth:TTC0763 putative hydrolase; PFAM: dienelactone hydrolase; SPTR: C1XQU2 Dienelactone hydrolase family protein; PFAM: Prolyl oligopeptidase family.
       0.617
ADH63881.1
Roadblock/LC7 family protein; InterPro IPR004942; KEGG: ttj:TTHA1131 gliding protein (MglB); PFAM: Roadblock/LC7 family protein; SPTR: C1XQU4 Roadblock/LC7 domain-containing protein; PFAM: Roadblock/LC7 domain.
       0.583
ADH63884.1
Oxygen-independent coproporphyrinogen III oxidase; Probably acts as a heme chaperone, transferring heme to an unknown acceptor. Binds one molecule of heme per monomer, possibly covalently. Binds 1 [4Fe-4S] cluster. The cluster is coordinated with 3 cysteines and an exchangeable S-adenosyl-L-methionine. Belongs to the anaerobic coproporphyrinogen-III oxidase family.
       0.487
ADH63880.1
Gliding motility protein; COGs: COG2229 GTPase; InterPro IPR001806; KEGG: tth:TTC0767 gliding motility protein; SPTR: C1XQU5 Predicted GTPase, COG2229; PFAM: ADP-ribosylation factor family.
       0.422
Your Current Organism:
Meiothermus silvanus
NCBI taxonomy Id: 526227
Other names: M. silvanus DSM 9946, Meiothermus silvanus ATCC 700542, Meiothermus silvanus DSM 9946, Meiothermus silvanus VI-R2, Meiothermus silvanus str. DSM 9946, Meiothermus silvanus strain DSM 9946
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