STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
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Gene Fusion
Cooccurrence
Coexpression
Experiments
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Textmining
[Homology]
Score
ADH64700.1Carbohydrate kinase, FGGY; COGs: COG1070 Sugar (pentulose and hexulose) kinase; InterPro IPR018484:IPR018485; KEGG: ddr:Deide_3p01560 putative rhamnulokinase; PFAM: Carbohydrate kinase, FGGY-like; SPTR: C1XTP6 Pentulose/hexulose kinase; PFAM: FGGY family of carbohydrate kinases, N-terminal domain; FGGY family of carbohydrate kinases, C-terminal domain; TIGRFAM: rhamnulokinase. (516 aa)    
Predicted Functional Partners:
ADH64698.1
COGs: COG4952 sugar isomerase; InterPro IPR013457:IPR013022:IPR012307; KEGG: dge:Dgeo_2455 rhamnose isomerase-related protein; PFAM: Xylose isomerase domain protein TIM barrel; SPTR: C1XTP8 L-rhamnose isomerase; TIGRFAM: L-rhamnose isomerase; PFAM: Xylose isomerase-like TIM barrel; TIGRFAM: L-rhamnose isomerase, Streptomyces subtype.
 
  
 0.993
ADH64699.1
Rhamnulose-1-phosphate aldolase/alcohol dehydrogenase; COGs: COG3347 conserved hypothetical protein; InterProIPR016040:IPR001303:IPR002198:IPR013454:IPR 002347; KEGG: dge:Dgeo_2454 short chain dehydrogenase; PFAM: short-chain dehydrogenase/reductase SDR; class II aldolase/adducin family protein; SPTR: C1XTP7 Rhamnulose-1-phosphate aldolase/alcohol dehydrogenase; TIGRFAM: rhamnulose-1-phosphate aldolase/alcohol dehydrogenase; PFAM: Class II Aldolase and Adducin N-terminal domain; short chain dehydrogenase; TIGRFAM: rhamnulose-1-phosphate aldolase/alcohol dehydrogenase.
 
 
 0.968
ADH64696.1
Putative secreted solute-binding lipoprotein; COGs: COG1879 ABC-type sugar transport system periplasmic component; KEGG: rxy:Rxyl_1681 putative secreted solute-binding lipoprotein; SPTR: C1XTQ0 Monosaccharide ABC transporter substrate-binding protein, CUT2 family; TIGRFAM: rhamnose ABC transporter, rhamnose-binding protein.
 
  
 0.844
ADH64697.1
Protein of unknown function DUF1362; COGs: COG4288 conserved hypothetical protein; InterPro IPR009794; KEGG: csc:Csac_1017 hypothetical protein; PFAM: protein of unknown function DUF1362; SPTR: C1XTP9 Uncharacterized conserved protein; PFAM: Anabaena sensory rhodopsin transducer.
 
     0.788
xylA
COGs: COG2115 Xylose isomerase; InterPro IPR013022:IPR001998:IPR012307:IPR013453; KEGG: dge:Dgeo_2692 xylose isomerase; PFAM: Xylose isomerase domain protein TIM barrel; PRIAM: Xylose isomerase; SPTR: C1XWA3 Xylose isomerase; TIGRFAM: xylose isomerase; PFAM: Xylose isomerase-like TIM barrel; TIGRFAM: xylose isomerase, Arthrobacter type; Belongs to the xylose isomerase family.
 
  
 0.623
ADH64692.1
Transcriptional regulator, DeoR family; COGs: COG1349 Transcriptional regulators of sugar metabolism; InterPro IPR001034:IPR018356:IPR014036; KEGG: dge:Dgeo_2456 DeoR family transcriptional regulator; PFAM: regulatory protein DeoR; SMART: regulatory protein DeoR; SPTR: C1XTQ4 Transcriptional regulator of sugar metabolism; PFAM: Bacterial regulatory proteins, deoR family; DeoR-like helix-turn-helix domain.
  
  
 0.500
rbsA
ABC transporter related protein; Part of the ABC transporter complex RbsABC involved in ribose import. Responsible for energy coupling to the transport system. Belongs to the ABC transporter superfamily. Ribose importer (TC 3.A.1.2.1) family.
  
  
 0.500
ADH62583.1
Xylose isomerase domain protein TIM barrel; COGs: COG1082 Sugar phosphate isomerase/epimerase; InterPro IPR013022:IPR012307; KEGG: sco:SCO7491 hypothetical protein; PFAM: Xylose isomerase domain protein TIM barrel; SPTR: C1XWD6 Sugar phosphate isomerase/epimerase; PFAM: Xylose isomerase-like TIM barrel.
 
  
 0.483
ADH64694.1
Inner-membrane translocator; COGs: COG1172 Ribose/xylose/arabinose/galactoside ABC-type transport systems permease components; InterPro IPR001851; KEGG: sus:Acid_7825 inner-membrane translocator; PFAM: inner-membrane translocator; SPTR: C1XTQ2 Monosaccharide ABC transporter membrane protein, CUT2 family; PFAM: Branched-chain amino acid transport system / permease component.
  
  
 0.482
ADH64695.1
Inner-membrane translocator; COGs: COG1172 Ribose/xylose/arabinose/galactoside ABC-type transport systems permease components; InterPro IPR001851; KEGG: rxy:Rxyl_1682 inner-membrane translocator; PFAM: inner-membrane translocator; SPTR: C1XTQ1 Monosaccharide ABC transporter membrane protein, CUT2 family; PFAM: Branched-chain amino acid transport system / permease component.
  
  
 0.482
Your Current Organism:
Meiothermus silvanus
NCBI taxonomy Id: 526227
Other names: M. silvanus DSM 9946, Meiothermus silvanus ATCC 700542, Meiothermus silvanus DSM 9946, Meiothermus silvanus VI-R2, Meiothermus silvanus str. DSM 9946, Meiothermus silvanus strain DSM 9946
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