Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ADH64854.1 | lspA | Mesil_3016 | Mesil_3017 | Integrase catalytic region; InterPro IPR001584:IPR012337:IPR009057; KEGG: saf:SULAZ_1706 putative transposase; PFAM: Integrase catalytic region; SPTR: C1XV03 Integrase family protein; PFAM: Integrase core domain. | Lipoprotein signal peptidase; This protein specifically catalyzes the removal of signal peptides from prolipoproteins; Belongs to the peptidase A8 family. | 0.533 |
ADH64854.1 | rpmB | Mesil_3016 | Mesil_3015 | Integrase catalytic region; InterPro IPR001584:IPR012337:IPR009057; KEGG: saf:SULAZ_1706 putative transposase; PFAM: Integrase catalytic region; SPTR: C1XV03 Integrase family protein; PFAM: Integrase core domain. | Ribosomal protein L28; InterPro IPR001383; KEGG: ttj:TTHA0042 50S ribosomal protein L28; SPTR: C1XV04 LSU ribosomal protein L28P; TIGRFAM: ribosomal protein L28; PFAM: Ribosomal L28 family; TIGRFAM: ribosomal protein L28; Belongs to the bacterial ribosomal protein bL28 family. | 0.548 |
lspA | ADH64854.1 | Mesil_3017 | Mesil_3016 | Lipoprotein signal peptidase; This protein specifically catalyzes the removal of signal peptides from prolipoproteins; Belongs to the peptidase A8 family. | Integrase catalytic region; InterPro IPR001584:IPR012337:IPR009057; KEGG: saf:SULAZ_1706 putative transposase; PFAM: Integrase catalytic region; SPTR: C1XV03 Integrase family protein; PFAM: Integrase core domain. | 0.533 |
lspA | rpmB | Mesil_3017 | Mesil_3015 | Lipoprotein signal peptidase; This protein specifically catalyzes the removal of signal peptides from prolipoproteins; Belongs to the peptidase A8 family. | Ribosomal protein L28; InterPro IPR001383; KEGG: ttj:TTHA0042 50S ribosomal protein L28; SPTR: C1XV04 LSU ribosomal protein L28P; TIGRFAM: ribosomal protein L28; PFAM: Ribosomal L28 family; TIGRFAM: ribosomal protein L28; Belongs to the bacterial ribosomal protein bL28 family. | 0.424 |
rpmB | ADH64854.1 | Mesil_3015 | Mesil_3016 | Ribosomal protein L28; InterPro IPR001383; KEGG: ttj:TTHA0042 50S ribosomal protein L28; SPTR: C1XV04 LSU ribosomal protein L28P; TIGRFAM: ribosomal protein L28; PFAM: Ribosomal L28 family; TIGRFAM: ribosomal protein L28; Belongs to the bacterial ribosomal protein bL28 family. | Integrase catalytic region; InterPro IPR001584:IPR012337:IPR009057; KEGG: saf:SULAZ_1706 putative transposase; PFAM: Integrase catalytic region; SPTR: C1XV03 Integrase family protein; PFAM: Integrase core domain. | 0.548 |
rpmB | lspA | Mesil_3015 | Mesil_3017 | Ribosomal protein L28; InterPro IPR001383; KEGG: ttj:TTHA0042 50S ribosomal protein L28; SPTR: C1XV04 LSU ribosomal protein L28P; TIGRFAM: ribosomal protein L28; PFAM: Ribosomal L28 family; TIGRFAM: ribosomal protein L28; Belongs to the bacterial ribosomal protein bL28 family. | Lipoprotein signal peptidase; This protein specifically catalyzes the removal of signal peptides from prolipoproteins; Belongs to the peptidase A8 family. | 0.424 |