STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001957165_01806Unannotated protein. (327 aa)    
Predicted Functional Partners:
GCA_001957165_00360
Unannotated protein.
  
  
 0.907
GCA_001957165_01807
Unannotated protein.
       0.582
GCA_001957165_00358
Unannotated protein.
  
    0.491
GCA_001957165_00983
Unannotated protein.
  
 
 0.481
GCA_001957165_01506
Unannotated protein.
  
    0.438
GCA_001957165_01651
Unannotated protein.
 
   
 0.400
Your Current Organism:
Vibrio ostreicida
NCBI taxonomy Id: 526588
Other names: CECT 7398, DSM 21433, V. ostreicida, Vibrio ostreicida Prado et al. 2014, Vibrio sp. PP-200, Vibrio sp. PP-203, Vibrio sp. PP-204, marine bacterium PP-203, strain PP-203
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.