STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001957165_02502Unannotated protein. (118 aa)    
Predicted Functional Partners:
GCA_001957165_02501
Unannotated protein.
 
 0.999
GCA_001957165_02503
Unannotated protein.
 
 0.999
GCA_001957165_02955
Unannotated protein.
 
 
 0.945
GCA_001957165_00428
Unannotated protein.
    
 0.878
GCA_001957165_00148
Unannotated protein.
    
 0.844
GCA_001957165_01924
Unannotated protein.
 
  
 0.808
GCA_001957165_02500
Unannotated protein.
  
    0.806
GCA_001957165_02120
Unannotated protein.
    
 0.742
GCA_001957165_00618
Unannotated protein.
     
 0.712
GCA_001957165_02307
Unannotated protein.
  
  
  0.700
Your Current Organism:
Vibrio ostreicida
NCBI taxonomy Id: 526588
Other names: CECT 7398, DSM 21433, V. ostreicida, Vibrio ostreicida Prado et al. 2014, Vibrio sp. PP-200, Vibrio sp. PP-203, Vibrio sp. PP-204, marine bacterium PP-203, strain PP-203
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.