STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106512004Spore wall protein 2-like. (658 aa)    
Predicted Functional Partners:
mad2l1
Mitotic spindle assembly checkpoint protein MAD2A.
   
 0.676
bub3
Mitotic checkpoint protein BUB3.
   
 0.626
LOC106533743
Cytoskeleton-associated protein 5-like isoform X1.
   
 
 0.594
ckap5
Cytoskeleton-associated protein 5.
   
 
 0.594
aurka
Aurora kinase A; Belongs to the protein kinase superfamily.
   
 0.555
LOC106525373
Aurora kinase B-like; Belongs to the protein kinase superfamily.
   
 0.555
LOC106511799
Uncharacterized protein LOC106511799.
   
 0.476
bub1b
Mitotic checkpoint serine/threonine-protein kinase BUB1 beta.
   
 0.476
bub1
Mitotic checkpoint serine/threonine-protein kinase BUB1.
   
 0.476
LOC106528669
Uncharacterized protein LOC106528669 isoform X1.
   
 0.476
Your Current Organism:
Austrofundulus limnaeus
NCBI taxonomy Id: 52670
Other names: A. limnaeus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.