STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106512770Kinetochore-associated protein NSL1 homolog. (164 aa)    
Predicted Functional Partners:
dsn1
Kinetochore-associated protein DSN1 homolog.
   
 0.940
mis12
Protein MIS12 homolog.
    
 0.906
casc5
Protein CASC5.
   
 0.867
LOC106516491
Polyamine-modulated factor 1-like.
    
 0.866
LOC106512132
Keratin-associated protein 4-3-like.
   
 0.857
nuf2
Kinetochore protein Nuf2.
   
 0.812
spc24
Kinetochore protein Spc24.
   
 0.796
ndc80
Kinetochore protein NDC80 homolog.
   
 0.796
spc25
Kinetochore protein Spc25.
   
 0.784
bub1
Mitotic checkpoint serine/threonine-protein kinase BUB1.
   
 0.692
Your Current Organism:
Austrofundulus limnaeus
NCBI taxonomy Id: 52670
Other names: A. limnaeus
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