Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC106513219LOW QUALITY PROTEIN: disintegrin and metalloproteinase domain-containing protein 12-like. (974 aa)    
Predicted Functional Partners:
LOC106514862
Leucine-rich repeat LGI family member 2-like.
     
 0.440
LOC106516068
Hyaluronidase.
   
 
 0.433
hyal2
Hyaluronidase.
   
 
 0.433
LOC106517223
Hyaluronidase.
   
 
 0.433
vash1
Vasohibin-1 isoform X1.
      
 0.427
sh3pxd2a
SH3 and PX domain-containing protein 2A isoform X1.
    
 0.423
LOC106524472
SH3 and PX domain-containing protein 2A-like.
    
 0.423
sh3pxd2b
SH3 and PX domain-containing protein 2B isoform X1.
    
 0.420
cdh8
Cadherin-8; Cadherins are calcium-dependent cell adhesion proteins.
     
 0.412
LOC106513149
B-cadherin-like; Cadherins are calcium-dependent cell adhesion proteins.
    
  0.410
Your Current Organism:
Austrofundulus limnaeus
NCBI taxonomy Id: 52670
Other names: A. limnaeus
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