STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
edrf1Erythroid differentiation-related factor 1. (1249 aa)    
Predicted Functional Partners:
LOC106534272
Protein Hikeshi.
      
 0.582
LOC106521295
Presqualene diphosphate phosphatase-like.
      
 0.480
kcnk5
Potassium channel subfamily K member 5 isoform X1; Belongs to the two pore domain potassium channel (TC 1.A.1.8) family.
      
 0.431
gpr182
G-protein coupled receptor 182; Belongs to the G-protein coupled receptor 1 family.
      
 0.410
pik3cd
Phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit.
      
 0.408
tmem206
Transmembrane protein 206.
      
 0.408
LOC106522155
Immunoglobulin superfamily member 5-like.
      
 0.402
hspbp1
Hsp70-binding protein 1.
    
 
 0.402
igsf5
Immunoglobulin superfamily member 5.
      
 0.402
Your Current Organism:
Austrofundulus limnaeus
NCBI taxonomy Id: 52670
Other names: A. limnaeus
Server load: low (36%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.