STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106513234Heterogeneous nuclear ribonucleoprotein A0-like. (297 aa)    
Predicted Functional Partners:
LOC106516248
Heterogeneous nuclear ribonucleoprotein K-like.
   
 0.840
hnrnpk
Heterogeneous nuclear ribonucleoprotein K isoform X1.
   
 0.840
hnrnpm
Heterogeneous nuclear ribonucleoprotein M isoform X1.
   
 0.831
srsf2
Serine/arginine-rich splicing factor 2.
  
 0.785
LOC106520777
Heterogeneous nuclear ribonucleoprotein C-like.
   
 0.775
LOC106532296
Heterogeneous nuclear ribonucleoprotein C-like isoform X1.
   
 0.775
ncbp1
Nuclear cap-binding protein subunit 1.
    
 0.768
rbmx
RNA-binding motif protein, X chromosome.
  
0.738
hnrnph3
Heterogeneous nuclear ribonucleoprotein H3.
   
 0.726
hnrnph1
Heterogeneous nuclear ribonucleoprotein H isoform X1.
   
 0.726
Your Current Organism:
Austrofundulus limnaeus
NCBI taxonomy Id: 52670
Other names: A. limnaeus
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