STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106513964LIM domain-containing protein. (343 aa)    
Predicted Functional Partners:
rsu1
Ras suppressor protein 1.
   
 0.970
ilk
Integrin-linked protein kinase.
   
 0.912
LOC106529737
Integrin-linked protein kinase.
   
 0.912
parvb
Beta-parvin.
   
 0.860
parva
Alpha-parvin isoform X1.
   
 0.860
LOC106523667
Gamma-parvin-like.
   
 0.751
parvg
Gamma-parvin.
   
 0.751
LOC106528412
Uncharacterized protein LOC106528412.
   
 0.743
pidd1
P53-induced death domain-containing protein 1.
    
 0.705
tmem203
Transmembrane protein 203.
   
 0.664
Your Current Organism:
Austrofundulus limnaeus
NCBI taxonomy Id: 52670
Other names: A. limnaeus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.