STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106514187C-C chemokine receptor type 8-like; Belongs to the G-protein coupled receptor 1 family. (340 aa)    
Predicted Functional Partners:
LOC106524538
Chemokine XC receptor 1-like; Belongs to the G-protein coupled receptor 1 family.
   
 
0.906
LOC106525953
C-C chemokine receptor type 4-like; Belongs to the G-protein coupled receptor 1 family.
     
 
0.900
LOC106521019
T-cell surface glycoprotein CD4-like.
   
 0.839
LOC106520002
C-C motif chemokine 4-like.
   
 0.722
LOC106514244
C-C chemokine receptor type 1-like isoform X1; Belongs to the G-protein coupled receptor 1 family.
  
0.642
LOC106522573
LOW QUALITY PROTEIN: C-X-C chemokine receptor type 4-like; Belongs to the G-protein coupled receptor 1 family.
   
0.635
cxcr4
C-X-C chemokine receptor type 4; Belongs to the G-protein coupled receptor 1 family.
   
0.635
LOC106521077
C-X-C motif chemokine 5-like isoform X1; Belongs to the intercrine alpha (chemokine CxC) family.
    
 0.586
cxcl12
Stromal cell-derived factor 1 isoform X1.
    
 0.586
LOC106525440
C-C motif chemokine 4-like.
   
 0.579
Your Current Organism:
Austrofundulus limnaeus
NCBI taxonomy Id: 52670
Other names: A. limnaeus
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