STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
slc25a43Solute carrier family 25 member 43; Belongs to the mitochondrial carrier (TC 2.A.29) family. (344 aa)    
Predicted Functional Partners:
fau
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
   
   0.832
rpl14
60S ribosomal protein L14.
   
 
 0.656
rpl8
60S ribosomal protein L8.
   
 
 0.595
rpl6
60S ribosomal protein L6.
   
 
 0.582
rps18
40S ribosomal protein S18; Belongs to the universal ribosomal protein uS13 family.
   
 
 0.579
rpl28
60S ribosomal protein L28.
   
   0.569
slc25a53
Solute carrier family 25 member 53; Belongs to the mitochondrial carrier (TC 2.A.29) family.
      
 0.567
frmd7
FERM domain-containing protein 7.
      
 0.559
rps23
40S ribosomal protein S23; Belongs to the universal ribosomal protein uS12 family.
   
 
 0.559
rps4x
40S ribosomal protein S4; Belongs to the eukaryotic ribosomal protein eS4 family.
   
   0.554
Your Current Organism:
Austrofundulus limnaeus
NCBI taxonomy Id: 52670
Other names: A. limnaeus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.