STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mrpl1539S ribosomal protein L15, mitochondrial. (296 aa)    
Predicted Functional Partners:
fau
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
   
 0.999
mrps9
28S ribosomal protein S9, mitochondrial; Belongs to the universal ribosomal protein uS9 family.
  
 
 0.999
mrpl17
39S ribosomal protein L17, mitochondrial; Belongs to the bacterial ribosomal protein bL17 family.
  
 
 0.999
rpl23
60S ribosomal protein L23; Belongs to the universal ribosomal protein uL14 family.
  
 0.999
mrpl36
Ribosomal protein; Belongs to the bacterial ribosomal protein bL36 family.
  
 
 0.999
mrpl9
39S ribosomal protein L9, mitochondrial.
  
 
 0.998
mrps6
28S ribosomal protein S6, mitochondrial.
   
 
 0.998
mrpl4
39S ribosomal protein L4, mitochondrial.
  
 0.998
mrps16
28S ribosomal protein S16, mitochondrial.
   
 
 0.998
mrpl22
39S ribosomal protein L22, mitochondrial; Belongs to the universal ribosomal protein uL22 family.
  
 0.998
Your Current Organism:
Austrofundulus limnaeus
NCBI taxonomy Id: 52670
Other names: A. limnaeus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.