STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106518640Inositol 1,4,5-trisphosphate receptor type 1-like. (134 aa)    
Predicted Functional Partners:
ubr1
E3 ubiquitin-protein ligase; Ubiquitin ligase protein which is a component of the N-end rule pathway. Recognizes and binds to proteins bearing specific N- terminal residues that are destabilizing according to the N-end rule, leading to their ubiquitination and subsequent degradation.
   
  
 0.567
lyve1
Lymphatic vessel endothelial hyaluronic acid receptor 1 isoform X1.
    
 0.495
mrvi1
Protein MRVI1 isoform X1.
    
 0.495
LOC106515195
Stromal interaction molecule 2-like.
    
 0.485
stim2
Stromal interaction molecule 2.
    
 0.485
LOC106533718
Stromal interaction molecule 1-like.
    
 0.485
stim1
Stromal interaction molecule 1 isoform X1.
    
 0.485
LOC106535204
Inositol 1,4,5-trisphosphate receptor type 1-like.
 
     0.454
LOC106511229
Adenosylhomocysteinase.
    
 0.441
LOC106516135
Adenosylhomocysteinase.
    
 0.441
Your Current Organism:
Austrofundulus limnaeus
NCBI taxonomy Id: 52670
Other names: A. limnaeus
Server load: low (26%) [HD]