STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
zcchc7Zinc finger CCHC domain-containing protein 7. (388 aa)    
Predicted Functional Partners:
LOC106516329
Zinc finger CCHC domain-containing protein 7-like isoform X1.
  
  
 
0.906
skiv2l2
Superkiller viralicidic activity 2-like 2.
   
 
 0.783
papd5
Non-canonical poly(A) RNA polymerase PAPD5.
   
 
 0.704
LOC106514254
Non-canonical poly(A) RNA polymerase PAPD7-like isoform X1.
   
 
 0.646
papd7
Non-canonical poly(A) RNA polymerase PAPD7 isoform X1.
   
 
 0.646
LOC106520931
Zinc finger CCHC domain-containing protein 7-like.
 
      0.623
exosc10
Exosome component 10.
   
 
 0.488
exosc1
Exosome complex component CSL4.
   
  
 0.470
ncbp1
Nuclear cap-binding protein subunit 1.
    
 
 0.463
LOC106512472
Helicase SKI2W-like.
   
 
 0.452
Your Current Organism:
Austrofundulus limnaeus
NCBI taxonomy Id: 52670
Other names: A. limnaeus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.