STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106522623Matrilin-3-like isoform X1. (494 aa)    
Predicted Functional Partners:
lum
Lumican.
   
 0.610
mfap2
Microfibrillar-associated protein 2.
   
 0.457
rbpjl
LOW QUALITY PROTEIN: recombining binding protein suppressor of hairless-like protein isoform X1.
   
 0.436
LOC106529655
Transforming growth factor beta-1-like.
   
 0.421
arid4b
AT-rich interactive domain-containing protein 4B isoform X1.
    
 0.405
arid4a
AT-rich interactive domain-containing protein 4A.
    
 0.405
furin
Furin isoform X1; Belongs to the peptidase S8 family.
   
 0.402
LOC106532108
Furin-1-like; Belongs to the peptidase S8 family.
   
 0.402
Your Current Organism:
Austrofundulus limnaeus
NCBI taxonomy Id: 52670
Other names: A. limnaeus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.