STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106523189Transmembrane protein 5-like. (440 aa)    
Predicted Functional Partners:
fkrp
Fukutin-related protein.
     
 0.947
b4gat1
Beta-1,4-glucuronyltransferase 1.
   
 
 0.947
fktn
Fukutin.
   
 
 0.560
pomgnt1
Protein O-linked-mannose beta-1,2-N-acetylglucosaminyltransferase 1 isoform X1.
    
 
 0.518
ispd
Isoprenoid synthase domain-containing protein isoform X1.
  
   
 0.512
pomt2
Protein O-mannosyl-transferase 2.
   
  
 0.508
pomt1
Protein O-mannosyl-transferase 1.
   
  
 0.504
pomk
Protein O-mannose kinase isoform X1.
      
 0.499
pomgnt2
Protein O-linked-mannose beta-1,4-N-acetylglucosaminyltransferase 2.
      
 0.497
dolk
Dolichol kinase.
      
 0.471
Your Current Organism:
Austrofundulus limnaeus
NCBI taxonomy Id: 52670
Other names: A. limnaeus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.