STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
socs4Suppressor of cytokine signaling 4. (391 aa)    
Predicted Functional Partners:
insr
Tyrosine-protein kinase receptor.
    
 0.919
tceb1
Transcription elongation factor B polypeptide 1; Belongs to the SKP1 family.
    
 0.750
LOC106521413
Transcription elongation factor B polypeptide 2.
    
 0.696
LOC106529525
Transcription elongation factor B polypeptide 2-like.
    
 0.696
LOC106522755
Cullin-5; Belongs to the cullin family.
   
 0.590
LOC106535734
Cullin-5-like; Belongs to the cullin family.
   
 0.590
LOC106514630
Calpain-5-like isoform X1; Belongs to the cullin family.
   
 0.582
cul2
Cullin-2; Belongs to the cullin family.
   
 0.477
rbx1
E3 ubiquitin-protein ligase RBX1.
   
 0.443
rnf7
RING-box protein 2.
   
 0.443
Your Current Organism:
Austrofundulus limnaeus
NCBI taxonomy Id: 52670
Other names: A. limnaeus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.