STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106525320Receptor-type tyrosine-protein phosphatase eta-like. (749 aa)    
Predicted Functional Partners:
LOC106511318
Hepatocyte growth factor receptor-like.
    
 0.646
LOC106511608
Hepatocyte growth factor receptor-like; Belongs to the protein kinase superfamily. Tyr protein kinase family.
    
 0.646
LOC106516033
Macrophage-stimulating protein receptor-like isoform X1.
    
 0.646
met
Hepatocyte growth factor receptor.
    
 0.646
mst1r
Macrophage-stimulating protein receptor.
    
 0.646
rpl13a
60S ribosomal protein L13a; Belongs to the universal ribosomal protein uL13 family.
   
  0.415
Your Current Organism:
Austrofundulus limnaeus
NCBI taxonomy Id: 52670
Other names: A. limnaeus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.