STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
hgfacHepatocyte growth factor activator. (588 aa)    
Predicted Functional Partners:
wdr90
WD repeat-containing protein 90.
   
 0.887
spint1
Kunitz-type protease inhibitor 1.
    
 0.845
LOC106511318
Hepatocyte growth factor receptor-like.
    
 0.830
LOC106511608
Hepatocyte growth factor receptor-like; Belongs to the protein kinase superfamily. Tyr protein kinase family.
    
 0.830
LOC106516033
Macrophage-stimulating protein receptor-like isoform X1.
    
 0.830
met
Hepatocyte growth factor receptor.
    
 0.830
mst1r
Macrophage-stimulating protein receptor.
    
 0.830
ptk7
Inactive tyrosine-protein kinase 7; Belongs to the protein kinase superfamily. Tyr protein kinase family.
    
 0.792
LOC106528670
Kunitz-type protease inhibitor 1-like.
    
 0.785
c1qbp
Complement component 1 Q subcomponent-binding protein, mitochondrial.
    
 0.768
Your Current Organism:
Austrofundulus limnaeus
NCBI taxonomy Id: 52670
Other names: A. limnaeus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.