STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106525897Deoxyribonuclease; Belongs to the DNase I family. (295 aa)    
Predicted Functional Partners:
LOC106516409
Ras-related GTP-binding protein A.
   
 0.500
lamtor2
Ragulator complex protein LAMTOR2.
    
 0.466
rragc
Ras-related GTP-binding protein C.
    
 0.451
LOC106523613
Regulating synaptic membrane exocytosis protein 2-like.
   
 
 0.446
LOC106527525
Regulating synaptic membrane exocytosis protein 2-like.
   
 
 0.446
LOC106535561
Regulating synaptic membrane exocytosis protein 2-like.
   
 
 0.446
ikbke
Inhibitor of nuclear factor kappa-B kinase subunit epsilon.
    
 0.439
chuk
Inhibitor of nuclear factor kappa-B kinase subunit alpha.
    
 0.439
LOC106529896
Serine/threonine-protein kinase TBK1-like.
    
 0.439
LOC106533626
Inhibitor of nuclear factor kappa-B kinase subunit alpha-like.
    
 0.439
Your Current Organism:
Austrofundulus limnaeus
NCBI taxonomy Id: 52670
Other names: A. limnaeus
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