STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106529661Galectin. (310 aa)    
Predicted Functional Partners:
slc8a1
Sodium/calcium exchanger 1 isoform X1; Belongs to the Ca(2+):cation antiporter (CaCA) (TC 2.A.19) family.
   
  
 0.640
LOC106535153
Sodium/calcium exchanger 1-like isoform X1; Belongs to the Ca(2+):cation antiporter (CaCA) (TC 2.A.19) family.
   
  
 0.640
LOC106515141
Troponin I, slow skeletal muscle-like isoform X1.
   
  
 0.635
LOC106525488
Troponin I, slow skeletal muscle-like.
   
  
 0.635
LOC106525487
Troponin I, slow skeletal muscle-like isoform X1.
   
  
 0.635
LOC106523123
Sodium/calcium exchanger 1-like; Belongs to the Ca(2+):cation antiporter (CaCA) (TC 2.A.19) family.
   
  
 0.634
LOC106524974
Sodium/calcium exchanger 3-like isoform X1; Belongs to the Ca(2+):cation antiporter (CaCA) (TC 2.A.19) family.
   
  
 0.634
LOC106515183
UPF0575 protein C19orf67 homolog isoform X1.
      
 0.632
LOC106521319
E3 ubiquitin-protein ligase TRIM39-like.
      
 0.627
myoz2
Myozenin-2.
      
 0.614
Your Current Organism:
Austrofundulus limnaeus
NCBI taxonomy Id: 52670
Other names: A. limnaeus
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