Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
LOC106512921 | aph1a | A0A2I4AN67 | A0A2I4CLH1 | Retinol dehydrogenase 7-like; Belongs to the short-chain dehydrogenases/reductases (SDR) family. | Gamma-secretase subunit APH-1A. | 0.644 |
LOC106516268 | LOC106532604 | A0A2I4B2P1 | A0A2I4CW02 | Neurogenic locus notch homolog protein 1-like. | Presenilin; Probable subunit of the gamma-secretase complex, an endoprotease complex that catalyzes the intramembrane cleavage of integral membrane proteins such as Notch receptors. Belongs to the peptidase A22A family. | 0.892 |
LOC106516268 | LOC106535157 | A0A2I4B2P1 | A0A2I4D5M1 | Neurogenic locus notch homolog protein 1-like. | Presenilin; Probable subunit of the gamma-secretase complex, an endoprotease complex that catalyzes the intramembrane cleavage of integral membrane proteins such as Notch receptors. Belongs to the peptidase A22A family. | 0.885 |
LOC106516268 | aph1a | A0A2I4B2P1 | A0A2I4CLH1 | Neurogenic locus notch homolog protein 1-like. | Gamma-secretase subunit APH-1A. | 0.863 |
LOC106516268 | ncstn | A0A2I4B2P1 | A0A2I4BL42 | Neurogenic locus notch homolog protein 1-like. | Nicastrin isoform X1. | 0.909 |
LOC106516268 | psenen | A0A2I4B2P1 | A0A2I4B8T9 | Neurogenic locus notch homolog protein 1-like. | Gamma-secretase subunit PEN-2. | 0.870 |
LOC106523944 | LOC106532604 | A0A2I4BZ09 | A0A2I4CW02 | Amyloid beta A4 protein-like. | Presenilin; Probable subunit of the gamma-secretase complex, an endoprotease complex that catalyzes the intramembrane cleavage of integral membrane proteins such as Notch receptors. Belongs to the peptidase A22A family. | 0.663 |
LOC106523944 | LOC106535157 | A0A2I4BZ09 | A0A2I4D5M1 | Amyloid beta A4 protein-like. | Presenilin; Probable subunit of the gamma-secretase complex, an endoprotease complex that catalyzes the intramembrane cleavage of integral membrane proteins such as Notch receptors. Belongs to the peptidase A22A family. | 0.663 |
LOC106523944 | aph1a | A0A2I4BZ09 | A0A2I4CLH1 | Amyloid beta A4 protein-like. | Gamma-secretase subunit APH-1A. | 0.577 |
LOC106523944 | ncstn | A0A2I4BZ09 | A0A2I4BL42 | Amyloid beta A4 protein-like. | Nicastrin isoform X1. | 0.795 |
LOC106523944 | psenen | A0A2I4BZ09 | A0A2I4B8T9 | Amyloid beta A4 protein-like. | Gamma-secretase subunit PEN-2. | 0.686 |
LOC106527096 | LOC106532604 | A0A2I4CBF8 | A0A2I4CW02 | Neurogenic locus notch homolog protein 2-like. | Presenilin; Probable subunit of the gamma-secretase complex, an endoprotease complex that catalyzes the intramembrane cleavage of integral membrane proteins such as Notch receptors. Belongs to the peptidase A22A family. | 0.735 |
LOC106527096 | LOC106535157 | A0A2I4CBF8 | A0A2I4D5M1 | Neurogenic locus notch homolog protein 2-like. | Presenilin; Probable subunit of the gamma-secretase complex, an endoprotease complex that catalyzes the intramembrane cleavage of integral membrane proteins such as Notch receptors. Belongs to the peptidase A22A family. | 0.742 |
LOC106527096 | aph1a | A0A2I4CBF8 | A0A2I4CLH1 | Neurogenic locus notch homolog protein 2-like. | Gamma-secretase subunit APH-1A. | 0.716 |
LOC106527096 | ncstn | A0A2I4CBF8 | A0A2I4BL42 | Neurogenic locus notch homolog protein 2-like. | Nicastrin isoform X1. | 0.758 |
LOC106527096 | psenen | A0A2I4CBF8 | A0A2I4B8T9 | Neurogenic locus notch homolog protein 2-like. | Gamma-secretase subunit PEN-2. | 0.709 |
LOC106528756 | LOC106532604 | A0A2I4CHJ2 | A0A2I4CW02 | Neurogenic locus notch homolog protein 1-like. | Presenilin; Probable subunit of the gamma-secretase complex, an endoprotease complex that catalyzes the intramembrane cleavage of integral membrane proteins such as Notch receptors. Belongs to the peptidase A22A family. | 0.892 |
LOC106528756 | LOC106535157 | A0A2I4CHJ2 | A0A2I4D5M1 | Neurogenic locus notch homolog protein 1-like. | Presenilin; Probable subunit of the gamma-secretase complex, an endoprotease complex that catalyzes the intramembrane cleavage of integral membrane proteins such as Notch receptors. Belongs to the peptidase A22A family. | 0.885 |
LOC106528756 | aph1a | A0A2I4CHJ2 | A0A2I4CLH1 | Neurogenic locus notch homolog protein 1-like. | Gamma-secretase subunit APH-1A. | 0.863 |
LOC106528756 | ncstn | A0A2I4CHJ2 | A0A2I4BL42 | Neurogenic locus notch homolog protein 1-like. | Nicastrin isoform X1. | 0.909 |
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