STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
apoeApolipoprotein E. (251 aa)    
Predicted Functional Partners:
LOC106523747
Apolipoprotein A-I-like.
  
0.762
LOC106518200
Alpha-synuclein; Belongs to the synuclein family.
    
 0.759
apoa4
Apolipoprotein A-IV.
  
 
 0.758
LOC106523749
Apolipoprotein A-I-like.
  
0.754
LOC106521237
Apolipoprotein B-100-like isoform X1.
   
 0.702
apob
Apolipoprotein B-100 isoform X1.
   
 0.702
LOC106534304
Apolipoprotein B-100-like.
   
 0.702
LOC106529956
Uncharacterized protein LOC106529956.
   
 0.643
LOC106534493
Uncharacterized protein LOC106534493.
   
 0.643
xbp1
LOW QUALITY PROTEIN: X-box-binding protein 1.
   
  
 0.598
Your Current Organism:
Austrofundulus limnaeus
NCBI taxonomy Id: 52670
Other names: A. limnaeus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.