STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC10653033115 kDa selenoprotein. (153 aa)    
Predicted Functional Partners:
LOC106534859
Selenoprotein T; Belongs to the SelWTH family. Selenoprotein T subfamily.
   
  
 0.655
vimp
Selenoprotein S.
   
  
 0.634
LOC106513075
Selenoprotein K.
      
 0.633
LOC106523783
Selenoprotein M-like.
      
 0.624
LOC106523197
Selenoprotein O.
      
 0.619
sepn1
Selenoprotein N.
      
 0.613
LOC106533291
Selenoprotein T; Belongs to the SelWTH family. Selenoprotein T subfamily.
   
  
 0.599
txnrd2
Thioredoxin reductase 2, mitochondrial isoform X1.
      
 0.582
LOC106534460
Selenoprotein H.
      
 0.582
LOC106512205
methionine-R-sulfoxide reductase B1-A-like.
      
 0.574
Your Current Organism:
Austrofundulus limnaeus
NCBI taxonomy Id: 52670
Other names: A. limnaeus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.