STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106532623SH3 domain-binding protein 5-like. (427 aa)    
Predicted Functional Partners:
LOC106524909
Ras-related protein Rab-11B.
    
 
 0.526
rab25
Ras-related protein Rab-25.
    
 
 0.526
LOC106532522
Ras-related protein Rab-11B-like.
    
 
 0.526
LOC106532525
Ras-related protein Rab-11B-like.
    
 
 0.526
LOC106532906
Ras-related protein Rab-11A-like.
    
 
 0.526
telo2
Telomere length regulation protein TEL2 homolog.
      
 0.467
LOC106515783
Ras-related protein Rab-25-like.
    
 
 0.440
rabl2b
Rab-like protein 2B.
    
 
 0.440
LOC106528035
Ras-related protein Rab-25-like.
    
 
 0.440
sncaip
Synphilin-1.
    
 
 0.416
Your Current Organism:
Austrofundulus limnaeus
NCBI taxonomy Id: 52670
Other names: A. limnaeus
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