STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106535170LOW QUALITY PROTEIN: uncharacterized protein LOC106535170. (358 aa)    
Predicted Functional Partners:
LOC106528136
Glycogen [starch] synthase; Transfers the glycosyl residue from UDP-Glc to the non- reducing end of alpha-1,4-glucan.
   
 0.612
LOC106528141
Glycogen [starch] synthase; Transfers the glycosyl residue from UDP-Glc to the non- reducing end of alpha-1,4-glucan.
   
 0.612
LOC106528487
Glycogen [starch] synthase; Transfers the glycosyl residue from UDP-Glc to the non- reducing end of alpha-1,4-glucan.
   
 0.612
depdc5
DEP domain-containing protein 5.
    
 0.518
LOC106511491
Uncharacterized protein LOC106511491.
 
     0.499
LOC106524553
Uncharacterized protein LOC106524553.
 
     0.498
LOC106510933
Uncharacterized protein LOC106510933.
 
     0.496
LOC106512189
Uncharacterized protein LOC106512189.
 
     0.489
nprl3
Nitrogen permease regulator 3-like protein isoform X1.
   
 0.488
LOC106511713
Uncharacterized protein LOC106511713.
 
     0.486
Your Current Organism:
Austrofundulus limnaeus
NCBI taxonomy Id: 52670
Other names: A. limnaeus
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