STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106535548Uncharacterized protein LOC106535548. (400 aa)    
Predicted Functional Partners:
fancm
Fanconi anemia group M protein.
    
 0.670
LOC106526999
Uncharacterized protein LOC106526999.
 
     0.547
lin52
Protein lin-52 homolog isoform X1.
    
 0.456
LOC106534683
Uncharacterized protein LOC106534683.
 
     0.454
LOC106536397
Uncharacterized protein LOC106536397.
  
     0.423
LOC106536967
Uncharacterized protein K02A2.6-like.
  
     0.419
Your Current Organism:
Austrofundulus limnaeus
NCBI taxonomy Id: 52670
Other names: A. limnaeus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.