STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
sra1Steroid receptor RNA activator 1. (296 aa)    
Predicted Functional Partners:
kcnip1
Kv channel-interacting protein 1 isoform X1.
      
 0.635
dcp1a
mRNA-decapping enzyme 1A.
      
 0.595
tmem245
Transmembrane protein 245 isoform X1.
      
 0.562
LOC106517003
Vinculin.
      
 0.497
LOC106520353
Vinculin-like isoform X1.
      
 0.497
LOC106525615
BAG family molecular chaperone regulator 3-like.
      
 0.497
LOC106520193
Matrin-3-like.
      
 0.495
dcp1b
mRNA-decapping enzyme 1B.
      
 0.456
LOC106529431
Thyrotroph embryonic factor-like.
    
 
 0.416
LOC106536980
Hepatic leukemia factor-like.
    
 
 0.416
Your Current Organism:
Austrofundulus limnaeus
NCBI taxonomy Id: 52670
Other names: A. limnaeus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.