STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106535974Acid-sensing ion channel 1-like isoform X1; Belongs to the amiloride-sensitive sodium channel (TC 1.A.6) family. (550 aa)    
Predicted Functional Partners:
stoml1
Stomatin-like protein 1.
    
 0.593
gak
cyclin-G-associated kinase isoform X1.
      
 0.560
LOC106519874
cyclin-G-associated kinase-like.
      
 0.560
LOC106513554
Erythrocyte band 7 integral membrane protein-like.
    
 0.434
LOC106514111
Erythrocyte band 7 integral membrane protein-like.
    
 0.434
stoml3
Stomatin-like protein 3.
    
 0.434
nphs2
Podocin isoform X1.
    
 0.402
Your Current Organism:
Austrofundulus limnaeus
NCBI taxonomy Id: 52670
Other names: A. limnaeus
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