STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106536696Inactive carboxypeptidase-like protein X2 isoform X1. (949 aa)    
Predicted Functional Partners:
gak
cyclin-G-associated kinase isoform X1.
    
  0.916
LOC106519874
cyclin-G-associated kinase-like.
    
  0.916
sys1
Protein SYS1 homolog; Involved in protein trafficking. Belongs to the SYS1 family.
    
 
 0.655
dnajc6
Putative tyrosine-protein phosphatase auxilin isoform X1.
    
  0.505
LOC106532916
Tissue factor pathway inhibitor.
   
  
 0.403
spint1
Kunitz-type protease inhibitor 1.
   
  
 0.402
igf2r
LOW QUALITY PROTEIN: cation-independent mannose-6-phosphate receptor.
   
 
 0.400
Your Current Organism:
Austrofundulus limnaeus
NCBI taxonomy Id: 52670
Other names: A. limnaeus
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