STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SKC35616.1Hypothetical protein. (217 aa)    
Predicted Functional Partners:
SKC35605.1
MinD-like ATPase involved in chromosome partitioning or flagellar assembly.
 
  
 0.973
SKC76004.1
PAS domain-containing protein.
  
    0.938
SKC57033.1
Serine phosphatase RsbU, regulator of sigma subunit.
  
    0.930
SKC35621.1
DNA binding domain-containing protein, excisionase family.
 
   
 0.929
SKC57967.1
Serine phosphatase RsbU, regulator of sigma subunit.
   
    0.921
SKC35629.1
Hypothetical protein.
 
   
 0.821
SKC77704.1
TadE-like protein.
 
    0.817
SKC53475.1
Tight adherence protein B.
 
    0.804
SKC53484.1
Tight adherence protein C.
 
    0.802
SKC77698.1
Hypothetical protein.
  
     0.774
Your Current Organism:
Krasilnikoviella flava
NCBI taxonomy Id: 526729
Other names: CC 0387, CC0387, CCTCC AA208024, DSM 21481, JCM 16551, K. flava, Krasilnikoviella flava (Jiang et al. 2009) Nishijima et al. 2017, Promicromonospora flava, Promicromonospora flava Jiang et al. 2009, Promicromonospora sp. CC 0387
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.