STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SKC35695.1Sporulation and spore germination. (588 aa)    
Predicted Functional Partners:
SKC35719.1
Two-component system, OmpR family, sensor histidine kinase MtrB.
 
    0.843
SKC61257.1
Hypothetical protein.
  
     0.741
SKC52644.1
Membrane protein.
  
     0.647
SKC79675.1
SseB protein N-terminal domain-containing protein.
  
 
   0.641
SKC36210.1
Hypothetical protein.
  
     0.636
SKC61272.1
Hypothetical protein.
  
     0.626
SKC35688.1
Predicted amidophosphoribosyltransferases.
       0.619
SKC68771.1
Protein of unknown function.
  
     0.605
SKC38457.1
Flp pilus assembly protein CpaB.
  
     0.596
SKC35731.1
Membrane domain of glycerophosphoryl diester phosphodiesterase.
 
     0.584
Your Current Organism:
Krasilnikoviella flava
NCBI taxonomy Id: 526729
Other names: CC 0387, CC0387, CCTCC AA208024, DSM 21481, JCM 16551, K. flava, Krasilnikoviella flava (Jiang et al. 2009) Nishijima et al. 2017, Promicromonospora flava, Promicromonospora flava Jiang et al. 2009, Promicromonospora sp. CC 0387
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.