STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SKC38384.1Hypothetical protein. (195 aa)    
Predicted Functional Partners:
SKC38363.1
Hypothetical protein.
       0.798
SKC38356.1
Uncharacterized conserved protein YloU, alkaline shock protein (Asp23) family.
       0.793
SKC38359.1
Uncharacterized conserved protein YloU, alkaline shock protein (Asp23) family.
       0.793
SKC38371.1
Uncharacterized conserved protein YloU, alkaline shock protein (Asp23) family.
       0.782
SKC38375.1
Hypothetical protein.
       0.781
SKC38350.1
RNA polymerase sigma-70 factor, ECF subfamily.
       0.539
SKC38342.1
Hypothetical protein.
       0.485
SKC80891.1
Hypothetical protein.
   
    0.470
SKC67225.1
Hypothetical protein.
   
    0.453
SKC50083.1
Putative NADH-flavin reductase.
   
    0.439
Your Current Organism:
Krasilnikoviella flava
NCBI taxonomy Id: 526729
Other names: CC 0387, CC0387, CCTCC AA208024, DSM 21481, JCM 16551, K. flava, Krasilnikoviella flava (Jiang et al. 2009) Nishijima et al. 2017, Promicromonospora flava, Promicromonospora flava Jiang et al. 2009, Promicromonospora sp. CC 0387
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.