STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SKC38907.1LPS sulfotransferase NodH. (558 aa)    
Predicted Functional Partners:
SKC38888.1
Teichoic acid transport system permease protein.
 
     0.865
SKC38894.1
Teichoic acid transport system ATP-binding protein.
 
     0.864
SKC38902.1
UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing); Belongs to the UDP-N-acetylglucosamine 2-epimerase family.
       0.783
SKC38959.1
Spore maturation protein CgeB.
 
     0.776
SKC38850.1
Glycosyltransferase involved in cell wall bisynthesis.
  
     0.732
SKC66752.1
Right handed beta helix region.
  
     0.672
SKC52958.1
Putative aldouronate transport system substrate-binding protein.
  
     0.566
SKC81082.1
Hypothetical protein.
  
     0.557
SKC38870.1
UDPglucose 6-dehydrogenase.
       0.551
SKC57348.1
Multiple sugar transport system substrate-binding protein.
  
     0.533
Your Current Organism:
Krasilnikoviella flava
NCBI taxonomy Id: 526729
Other names: CC 0387, CC0387, CCTCC AA208024, DSM 21481, JCM 16551, K. flava, Krasilnikoviella flava (Jiang et al. 2009) Nishijima et al. 2017, Promicromonospora flava, Promicromonospora flava Jiang et al. 2009, Promicromonospora sp. CC 0387
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