STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SKC40933.1ABC-2 type transport system ATP-binding protein. (326 aa)    
Predicted Functional Partners:
SKC40925.1
ABC-2 type transport system permease protein.
 
    0.949
SKC40912.1
Two-component system, NarL family, sensor histidine kinase DesK.
    0.871
SKC40908.1
Two component transcriptional regulator, LuxR family.
     0.854
SKC40902.1
Protein of unknown function.
       0.618
SKC40936.1
Isopentenyldiphosphate isomerase.
       0.536
SKC40772.1
ABC-2 type transport system permease protein.
  
    0.519
SKC40992.1
ABC-2 type transport system permease protein.
   
  0.503
SKC65577.1
ABC-2 type transport system permease protein.
   
  0.503
SKC48084.1
ABC-2 type transport system permease protein.
 
    0.486
SKC74413.1
Oleandomycin transport system permease protein.
 
 
 0.478
Your Current Organism:
Krasilnikoviella flava
NCBI taxonomy Id: 526729
Other names: CC 0387, CC0387, CCTCC AA208024, DSM 21481, JCM 16551, K. flava, Krasilnikoviella flava (Jiang et al. 2009) Nishijima et al. 2017, Promicromonospora flava, Promicromonospora flava Jiang et al. 2009, Promicromonospora sp. CC 0387
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.