STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SKC41084.1Transcription regulator of the Arc/MetJ class. (101 aa)    
Predicted Functional Partners:
disA
Diadenylate cyclase; Has also diadenylate cyclase activity, catalyzing the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP). c-di-AMP likely acts as a signaling molecule that may couple DNA integrity with a cellular process.
  
     0.710
SKC41100.1
LytR cell envelope-related transcriptional attenuator.
       0.664
SKC52632.1
2'-5' RNA ligase.
  
     0.641
SKC61530.1
Uncharacterized conserved protein YlxW, UPF0749 family.
  
     0.585
SKC71267.1
Small basic protein.
  
     0.563
SKC71270.1
Uncharacterized conserved protein YlxW, UPF0749 family.
  
     0.553
SKC71263.1
Uncharacterized conserved protein YlxW, UPF0749 family.
  
     0.552
SKC41078.1
Methyltransferase domain-containing protein.
       0.497
SKC72662.1
Hypothetical protein.
  
     0.420
Your Current Organism:
Krasilnikoviella flava
NCBI taxonomy Id: 526729
Other names: CC 0387, CC0387, CCTCC AA208024, DSM 21481, JCM 16551, K. flava, Krasilnikoviella flava (Jiang et al. 2009) Nishijima et al. 2017, Promicromonospora flava, Promicromonospora flava Jiang et al. 2009, Promicromonospora sp. CC 0387
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