STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SKC41362.1GAF domain-containing protein. (235 aa)    
Predicted Functional Partners:
SKC41355.1
ANTAR domain-containing protein.
 
     0.874
SKC78979.1
Animal haem peroxidase.
  
     0.563
SKC41349.1
Protein of unknown function.
       0.539
SKC40096.1
Hypothetical protein.
  
     0.484
SKC48888.1
ABC-type branched-chain amino acid transport system, substrate-binding protein.
   
   0.477
SKC49177.1
Urea transport system substrate-binding protein.
   
   0.477
SKC81510.1
Branched-chain amino acid transport system substrate-binding protein.
   
   0.477
SKC82668.1
ABC-type branched-chain amino acid transport system, substrate-binding protein.
   
   0.477
SKC69142.1
Arginine decarboxylase.
  
     0.468
SKC81444.1
Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II.
  
     0.418
Your Current Organism:
Krasilnikoviella flava
NCBI taxonomy Id: 526729
Other names: CC 0387, CC0387, CCTCC AA208024, DSM 21481, JCM 16551, K. flava, Krasilnikoviella flava (Jiang et al. 2009) Nishijima et al. 2017, Promicromonospora flava, Promicromonospora flava Jiang et al. 2009, Promicromonospora sp. CC 0387
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.