Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SKC37236.1 | SKC42333.1 | SAMN04324258_0376 | SAMN04324258_0896 | Arylsulfatase. | Flavodoxin. | 0.603 |
SKC42320.1 | SKC42333.1 | SAMN04324258_0894 | SAMN04324258_0896 | Cupin domain protein. | Flavodoxin. | 0.793 |
SKC42320.1 | SKC42354.1 | SAMN04324258_0894 | SAMN04324258_0897 | Cupin domain protein. | Helix-turn-helix domain-containing protein. | 0.406 |
SKC42320.1 | SKC42369.1 | SAMN04324258_0894 | SAMN04324258_0900 | Cupin domain protein. | 4-carboxymuconolactone decarboxylase. | 0.726 |
SKC42333.1 | SKC37236.1 | SAMN04324258_0896 | SAMN04324258_0376 | Flavodoxin. | Arylsulfatase. | 0.603 |
SKC42333.1 | SKC42320.1 | SAMN04324258_0896 | SAMN04324258_0894 | Flavodoxin. | Cupin domain protein. | 0.793 |
SKC42333.1 | SKC42354.1 | SAMN04324258_0896 | SAMN04324258_0897 | Flavodoxin. | Helix-turn-helix domain-containing protein. | 0.439 |
SKC42333.1 | SKC42365.1 | SAMN04324258_0896 | SAMN04324258_0899 | Flavodoxin. | Aldo/keto reductase. | 0.414 |
SKC42333.1 | SKC42369.1 | SAMN04324258_0896 | SAMN04324258_0900 | Flavodoxin. | 4-carboxymuconolactone decarboxylase. | 0.613 |
SKC42333.1 | SKC56341.1 | SAMN04324258_0896 | SAMN04324258_1645 | Flavodoxin. | Hypothetical protein. | 0.503 |
SKC42333.1 | SKC60124.1 | SAMN04324258_0896 | SAMN04324258_1940 | Flavodoxin. | alpha-L-rhamnosidase. | 0.677 |
SKC42333.1 | ribBA | SAMN04324258_0896 | SAMN04324258_2820 | Flavodoxin. | 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; In the C-terminal section; belongs to the GTP cyclohydrolase II family. | 0.442 |
SKC42354.1 | SKC42320.1 | SAMN04324258_0897 | SAMN04324258_0894 | Helix-turn-helix domain-containing protein. | Cupin domain protein. | 0.406 |
SKC42354.1 | SKC42333.1 | SAMN04324258_0897 | SAMN04324258_0896 | Helix-turn-helix domain-containing protein. | Flavodoxin. | 0.439 |
SKC42365.1 | SKC42333.1 | SAMN04324258_0899 | SAMN04324258_0896 | Aldo/keto reductase. | Flavodoxin. | 0.414 |
SKC42365.1 | SKC42369.1 | SAMN04324258_0899 | SAMN04324258_0900 | Aldo/keto reductase. | 4-carboxymuconolactone decarboxylase. | 0.780 |
SKC42369.1 | SKC42320.1 | SAMN04324258_0900 | SAMN04324258_0894 | 4-carboxymuconolactone decarboxylase. | Cupin domain protein. | 0.726 |
SKC42369.1 | SKC42333.1 | SAMN04324258_0900 | SAMN04324258_0896 | 4-carboxymuconolactone decarboxylase. | Flavodoxin. | 0.613 |
SKC42369.1 | SKC42365.1 | SAMN04324258_0900 | SAMN04324258_0899 | 4-carboxymuconolactone decarboxylase. | Aldo/keto reductase. | 0.780 |
SKC56341.1 | SKC42333.1 | SAMN04324258_1645 | SAMN04324258_0896 | Hypothetical protein. | Flavodoxin. | 0.503 |
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