STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SKC42798.1Signal transduction histidine kinase. (417 aa)    
Predicted Functional Partners:
SKC42802.1
Two component transcriptional regulator, LuxR family.
 
  0.957
SKC36363.1
Two component transcriptional regulator, LuxR family.
  
  0.813
SKC62802.1
Two component transcriptional regulator, LuxR family.
  
  0.813
SKC47987.1
Two component transcriptional regulator, LuxR family.
  
  0.810
SKC39906.1
Two component transcriptional regulator, LuxR family.
  
  0.808
SKC71914.1
Two component transcriptional regulator, LuxR family.
  
  0.803
SKC67937.1
Two component transcriptional regulator, LuxR family.
  
  0.796
SKC36643.1
Two component transcriptional regulator, LuxR family.
  
  0.795
SKC75806.1
Two component transcriptional regulator, LuxR family.
  
  0.792
SKC76366.1
Two component transcriptional regulator, LuxR family.
  
  0.785
Your Current Organism:
Krasilnikoviella flava
NCBI taxonomy Id: 526729
Other names: CC 0387, CC0387, CCTCC AA208024, DSM 21481, JCM 16551, K. flava, Krasilnikoviella flava (Jiang et al. 2009) Nishijima et al. 2017, Promicromonospora flava, Promicromonospora flava Jiang et al. 2009, Promicromonospora sp. CC 0387
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.