node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SKC42212.1 | SKC50984.1 | SAMN04324258_0889 | SAMN04324258_1407 | Ribosomal protection tetracycline resistance protein. | Superfamily II DNA and RNA helicase; Belongs to the DEAD box helicase family. | 0.898 |
SKC42212.1 | SKC61503.1 | SAMN04324258_0889 | SAMN04324258_2081 | Ribosomal protection tetracycline resistance protein. | Peptidyl-prolyl cis-trans isomerase A (cyclophilin A); PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family. | 0.795 |
SKC42212.1 | SKC71474.1 | SAMN04324258_0889 | SAMN04324258_2997 | Ribosomal protection tetracycline resistance protein. | Peptidyl-prolyl cis-trans isomerase B (cyclophilin B). | 0.782 |
SKC42212.1 | pnp | SAMN04324258_0889 | SAMN04324258_3880 | Ribosomal protection tetracycline resistance protein. | Polyribonucleotide nucleotidyltransferase; Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'- direction. | 0.803 |
SKC42212.1 | rplC | SAMN04324258_0889 | SAMN04324258_1190 | Ribosomal protection tetracycline resistance protein. | Large subunit ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family. | 0.985 |
SKC42212.1 | rplM | SAMN04324258_0889 | SAMN04324258_1223 | Ribosomal protection tetracycline resistance protein. | LSU ribosomal protein L13P; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | 0.985 |
SKC42212.1 | rplX | SAMN04324258_0889 | SAMN04324258_1201 | Ribosomal protection tetracycline resistance protein. | Large subunit ribosomal protein L24; One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit. | 0.980 |
SKC42212.1 | rpsD | SAMN04324258_0889 | SAMN04324258_2984 | Ribosomal protection tetracycline resistance protein. | Small subunit ribosomal protein S4; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit. | 0.984 |
SKC50984.1 | SKC42212.1 | SAMN04324258_1407 | SAMN04324258_0889 | Superfamily II DNA and RNA helicase; Belongs to the DEAD box helicase family. | Ribosomal protection tetracycline resistance protein. | 0.898 |
SKC50984.1 | SKC61503.1 | SAMN04324258_1407 | SAMN04324258_2081 | Superfamily II DNA and RNA helicase; Belongs to the DEAD box helicase family. | Peptidyl-prolyl cis-trans isomerase A (cyclophilin A); PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family. | 0.900 |
SKC50984.1 | SKC71474.1 | SAMN04324258_1407 | SAMN04324258_2997 | Superfamily II DNA and RNA helicase; Belongs to the DEAD box helicase family. | Peptidyl-prolyl cis-trans isomerase B (cyclophilin B). | 0.892 |
SKC50984.1 | fusA | SAMN04324258_1407 | SAMN04324258_1187 | Superfamily II DNA and RNA helicase; Belongs to the DEAD box helicase family. | Elongation factor G; Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post-translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. EF-G/EF-2 subfamily. | 0.898 |
SKC50984.1 | nnrD | SAMN04324258_1407 | SAMN04324258_1238 | Superfamily II DNA and RNA helicase; Belongs to the DEAD box helicase family. | yjeF N-terminal region; Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. Catalyzes the epimerization of the S- and R-forms of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. This is a prerequisite for the S-specific NAD(P)H-hydrate dehydratase to allow the repair of both e [...] | 0.958 |
SKC50984.1 | pnp | SAMN04324258_1407 | SAMN04324258_3880 | Superfamily II DNA and RNA helicase; Belongs to the DEAD box helicase family. | Polyribonucleotide nucleotidyltransferase; Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'- direction. | 0.902 |
SKC50984.1 | rplC | SAMN04324258_1407 | SAMN04324258_1190 | Superfamily II DNA and RNA helicase; Belongs to the DEAD box helicase family. | Large subunit ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family. | 0.899 |
SKC50984.1 | rplM | SAMN04324258_1407 | SAMN04324258_1223 | Superfamily II DNA and RNA helicase; Belongs to the DEAD box helicase family. | LSU ribosomal protein L13P; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | 0.873 |
SKC50984.1 | rplX | SAMN04324258_1407 | SAMN04324258_1201 | Superfamily II DNA and RNA helicase; Belongs to the DEAD box helicase family. | Large subunit ribosomal protein L24; One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit. | 0.874 |
SKC50984.1 | rpsD | SAMN04324258_1407 | SAMN04324258_2984 | Superfamily II DNA and RNA helicase; Belongs to the DEAD box helicase family. | Small subunit ribosomal protein S4; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit. | 0.882 |
SKC61503.1 | SKC42212.1 | SAMN04324258_2081 | SAMN04324258_0889 | Peptidyl-prolyl cis-trans isomerase A (cyclophilin A); PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family. | Ribosomal protection tetracycline resistance protein. | 0.795 |
SKC61503.1 | SKC50984.1 | SAMN04324258_2081 | SAMN04324258_1407 | Peptidyl-prolyl cis-trans isomerase A (cyclophilin A); PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family. | Superfamily II DNA and RNA helicase; Belongs to the DEAD box helicase family. | 0.900 |